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Publications †
2015 †
(One paper is in revision; one paper is submitted; two papers are in preparation)
Shibano, T., Mamada, H., Hakuno, F., Takahashi, S., and Taira, M. (2015). The inner nuclear membrane protein Nemp1 is a new type of RanGTP-binding protein in eukaryotes. PLOS One, in press.
Matsuda, Y., Uno, Y., Kondo, M., Gilchrist, M. J., Zorn, A. M., Rokhsar, D. S., Schmid, M., and Taira, M. (2015). A new nomenclature of Xenopus laevis chromosomes based on the phylogenetic relationship to Silurana/Xenopus tropicalis. Cytogenet. Genome Res. in press.
Yamamoto, T., Tsukahara, T., Ishiguro, T., Hagiwara, H., Taira, M., Takeda, H. (2015). The medaka dhc2 mutant reveals conserved and distinct mechanisms of Hedgehog signaling in teleosts.
BMC Dev Biol. 2015 Feb 3;15(1):9.
2014 †
Yasuoka, Y., Suzuki, Y., Takahashi, S., Sudou, N., Haramoto, Y., Tando, Y., Kubokawa, K., Cho, K. W., Asashima, M., Sugano, S. and Taira, M. (2014). Occupancy of Tissue-Specific cis-Regulatory Modules by Otx2 and TLE/Groucho for Embryonic Head Specification. Nat. Commun. 5, Article number: 4322
2012 †
Sudou, N., Yamamoto, S., Ogino, H. and Taira, M. (2012). Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann–Mangold organizer. Development 139, 1651-1661.
Moriyama, Y., Kawanishi, T., Nakamura, R., Tsukahara, T., Sumiyama, K., Suster, M., Kawakami, K., Toyoda, A., Fujiyama, A., Yasuoka, Y., Nagao, Y., Sawatari, E., Shimikzu, A., Wakamatsu, Y., Hibi, M., Taira, M., Okabe, M., Naruse, K., Hashimoto, H., Shimada, A., Takeda, H. (2012). The medaka enhancer mutant for zic1/zic4 provides molecular insights into teleost caudal fin evolution. Curr. Biol., 22, 601-607.
2010 †
Venegas-Ferrin, M., Sudou, N., Taira, M. and del Pino, E. M. (2010). Comparison of Lim1 expression in embryos of frogs with different modes of reproduction. Int. J. Dev. Biol. 54, 195-202.
2009 †
Mii, Y. and Taira, M. (2009). Secreted Frizzled-related proteins enhance the diffusion of Wnt ligands and expand their signalling range. Development 136, 4083-4088.
Mukaigasa, K., Hanasaki, A., Maeno, M., Fujii, H., Hayashida, S.-i., Itoh, M., Kobayashi, M., Tochinai, S., Hatta, M., Iwabuchi, K., Taira, M., Onoe, K., and Izutsu, Y. (2009). The keratin-related Ouroboros proteins function as immune antigens mediating tail regression in Xenopus metamorphosis. Proc. Natl. Acad. Sci. USA 106, 18309-18314.
Takada, H., Kawana, T., Ito, Y., Kikuno, R. F., Mamada, H., Araki, T., Koga, H., Asashima, M. and Taira, M. (2009). The RNA binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development. Development 136, 2413-2422.
Yasuoka, Y., Kobayashi, M., Kurokawa, D., Akasaka, K., Saiga, H., and Taira, M. (2009). Evolutionary origins of blastoporal expression and organizer activity of the vertebrate gastrula organizer gene lhx1 and its ancient metazoan paralog lhx3. Development 136, 2005-2014.
Suga, A., Taira, M., and Nakagawa, S. (2009). LIM family transcription factors regulate the subtype-specific morphogenesis of retinal horizontal cells at post-migratory stages. Dev. Biol. 330, 318-328.
Mamada, H., Takahashi, N. and Taira, M. (2009). Involvement of an inner nuclear membrane protein, Nemp1, in Xenopus neural development through an interaction with the chromatin protein BAF. Dev. Biol. 327, 497-507.
2008 †
Kato, M., Hasunuma, N., Nakayama, R., Takeda, J., Itami, S., Taira, M., Manabe, M. and Osada, S. I. (2008). Progranulin, a secreted tumorigenesis and dementia-related factor, regulates mouse hair growth. J. Dermatol. Sci. 53, 234-236.
2007 †
del Pino, E. M., Venegas-Ferrin, M., Romero-Carvajal, A., Montenegro-Larrea, P., Saenz-Ponce, N., Moya, I. M., Alarcon, I., Sudou, N., Yamamoto, S., and Taira, M. (2007). Inaugural Article: A comparative analysis of frog early development. Proc. Natl. Acad. Sci. USA 104, 11882-11888.
Shibano, T., Takeda, M., Suetake, I., Kawakami, K., Asashima, M., Tajima, S., and Taira, M. (2007). Recombinant Tol2 transposase with activity in Xenopus embryos. FEBS Lett. 581, 4333-4336.
2006 †
Hamlet, M. R. J., Takeda, M., Taira, M., Kawakami, K., and Mead, P. E. (2006). Tol2 Transposon-mediated Transgenesis in Xenopus tropicalis. Genesis 44, 438-445.
Ishimura, A., Ng, J. K., Taira, M., Young, S. G., and Osada, S.-I. (2006). Man1, an inner nuclear membrane protein, regulates vascular remodeling by modulating transforming growth factor-beta signaling. Development 133, 3919-3928.
Tran, Y. H., Xu, Z., Kato, A., Mistry, A. C., Goya, Y., Taira, M., Brandt, S. J., and Hirose, S. (2006). Spliced isoforms of LIM-domain-binding protein (CLIM/NLI/Ldb) lacking the LIM-interaction domain. J. Biochem. 140, 105-119.
Suga, A., Hikasa, H. & Taira, M. (2006). Xenopus ADAMTS1 negatively modulates FGF signaling independent of its metalloprotease activity. Dev. Biol. 295, 26-39.
2005 †
Takahashi, N., Tochimoto, N., Ohmori, S.-y., Mamada, H., Itoh, M., Inamori, M., Shinga, J., Osada, S.-I., and Taira, M.: "Systematic screening forgenes specifically expressed in the anterior neuroectoderm during earlyXenopus development", Int. J. Dev. Biol. 49, 939-951 (2005).
Shibata, M., Itoh, M., Hikasa, H., Taira, S., and Taira, M.: "Role of Crescent in convergent extension movements by modulating Wnt signaling inearly Xenopus embryogenesis", Mech. Dev. 122, 1322-1339 (2005).
Takada, H., Hattori, D., Kitayama, A., Ueno, N., and Taira, M.: "Identification of target genes for the Xenopus Hes-related protein XHR1 as a prepattern factor specifying the midbrain-hindbrain boundary", Dev. Biol. 283, 253-267 (2005).
Takada, T., Iida, K., Sasaki, H., Taira, M., and Kimura, H.: "Expression of ADP-ribosylation factor (ARF)-like protein 6 (ARL6) during mouse embryonic development", Int. J. Dev. Biol. 49, 891-894 (2005).
2004 †
Naito, M., Katayama, R., Ishioka, T., Suga, A., Takubo, K., Nanjo, M., Hashimoto, C., Taira, M., Takada, S., Takada, R., Kitagawa, M., Matsuzawa, S., Reed, J. C., and Tsuruo, T.: "Cellular FLIP inhibits beta-catenin ubiquitylation and enhances Wnt signaling", Mol. Cell. Biol. 24, 8418-8427 (2004).
Kawakami, K., Imanaka, K., Itoh, M., and Taira, M.: "Excision ofthe Tol2 transposable element of the medaka fish Oryzias latipes in Xenopus laevis and Xenopus tropicalis", Gene 338, 93-98 (2004).
Hayashi, S., Itoh, M., Taira, S., Agata, K., and Taira, M.: "Expression patterns of Xenopus FGF receptor-like 1/nou-darake in early Xenopus development resemble those of planarian nou-darake and Xenopus FGF8", Dev. Dyn.230, 700-707. (2004).
2003 †
Hiratani, I., Yamamoto, N., Mochizuki, T., Ohmori, S., and Taira, M.: "Selectivedegradation of excess Ldb1 by Rnf12/RLIM confers proper Ldb1 expression levelsand Xlim-1/Ldb1 stoichiometry in Xenopus organizer functions", Development, 4161-4175 (2003).
Yamamoto, S., Hikasa, H., Ono, H., and Taira, M.: "Molecular link in the sequential induction of the Spemann organizer: direct activation of the cerberus gene by Xlim-1, Xotx2, Mix.1, and Siamois, immediately downstream from Nodal and Wnt signaling", Dev. Biol. 257, 190-204 (2003).
Osada, S.-I., Ohmori, S.-y., and Taira, M.: "XMAN1, an inner nuclear membrane protein, antagonizes BMP signaling by interacting with Smad1 in Xenopus embryos", Development 130, 1783-1794 (2003).
2002 †
Fujita, M., Itoh, M., Shibata, M., Taira, S., and Taira, M.: "Gene expression pattern analysis of the tight junction protein, Claudin, in the early morphogenesis of Xenopus embryos", Mech. Dev. 119S, S27-S30 (2002).
Hikasa, H., Shibata, M., Hiratani, I., and Taira, M.: "The Xenopus receptor tyrosine kinase Xror2 modulates morphogenetic movements of the axial mesoderm and neuroectoderm via Wnt signalling", Development, 5227-5239 (2002).
Cebria, F., Kobayashi, C., Umesono, Y., Nakazawa, M., Mineta, K., Ikeo, K., Gojobori, T., Itoh, M., Taira, M., Alvarado, A. S., and Agata, K.: "nou-darake, a FGFR-related gene restricts brain tissues to the head region of planarians", Nature, 620-624 (2002).
2001 †
Shinga, J., Itoh, M., Shiokawa, K., Taira, S., and Taira, M.: "Early patterning of the prospective midbrain-hindbrain boundary by the HES-related gene XHR1 in Xenopus embryos", Mech. Dev. 109, 225-239 (2001).
Shibata, M., Itoh, M., Ohmori, S.-y., Shinga, J., and Taira, M.: "Systematic screening and expression analysis of the head organizer genes in Xenopus embryos", Dev. Biol. 239, 241-256 (2001).
Kodjabachian, L., Karavanov, A. A., Hikasa, H., Hukriede, N. A., Aoki, T., Taira, M., and Dawid, I. B.: "A study of Xlim-1 function in Spemann's organizer", Int. J. Dev. Biol., 45, 209-218(2001).
Hiratani, I., Mochizuki, T., Tochimoto, N., and Taira, M.: "Functional Domains of the LIM Homeodomain Protein Xlim-1 Involved in Negative Regulation, Transactivation, and Axis Formation in Xenopus Embryos", Dev. Biol. 229, 456-467 (2001).
Hikasa, H., and Taira, M.: "A Xenopus homolog of a human p53-activated gene, PA26, is specifically expressed in the notochord", Mech. Dev. 100, 309-312 (2001).
2000 †
Takada, T., Iida, K., Akasaka, K., Yasue, H., Torii, R., Tsujimoto, G., Taira, M., and Kimura, H.: "Evaluation of Heterologous Insulator Function with Regard to Chromosomal Position Effect in the Mouse Blastocyst and Fetus", Mol. Reprod. Dev. 57, 232-237 (2000).
Nakano, H., Amemiya, S., Shiokawa, K., and Taira, M.: "RNA Interference (RNAi) for the Organizer-specific Gene Xlim-1 in Xenopus Embryos", Biochem. Biophys. Res. Commun. 274, 434-439 (2000).
Tsuji, T., Sato, A., Hiratani, I., Taira, M., Saigo, K., and Kojima, T.: "Requirements of Lim1, a Drosophila LIM-homeobox gene, for normal legand antennal development", Development 127, 4315-4323 (2000).
Shibata, M., Ono, H., Hikasa, H., Shinga, J., and Taira, M.: "Xenopus crescentencoding a Frizzled-like domain is expressed in the Spemann organizer andpronephros", Mech. Dev. 96, 243-246 (2000).
Mochizuki, T., Karavanov, A. A., Curtiss, P. E., Ault, K. T., Sugimoto, N., Watabe, T., Shiokawa, K., Jamrich, M., Cho, K. W. Y., Dawid, I. B., and Taira, M.: "Xlim-1 and LIM domain binding protein 1 cooperate with various transcription factors in the regulation of the goosecoid promoter", Dev. Biol. 224, 470-485 (2000).
Kondaiah, P., Taira, M., Vempati, U. D., and Dawid, I. B.: "Transforming growth factor-beta5 (TGF-beta5) expression during early development of Xenopus laevis", Mech. Dev. 95, 207-209 (2000).
1999 †
Zhao, Y., Sheng, H. Z., Amini, R., Grinberg, A., Lee, E., Huang, S., Taira, M., and Westphal, H.: "Control of hippocampal morphogenesis and neuronal differentiation by the LIM homeobox gene Lhx5", Science 284, 1155-1158 (1999).
1998 †
Bhatia-Dey, N., Taira, M., Conti, M. A., Nooruddin, H., and Adelstein, R. S.: "Differential expression of nonmuscle myosin heavy chain genes during Xenopus embryogenesis", Mech. Dev. 78, 33-36 (1998).
1997 †
Xu, R.-H., Kim, J., Taira, M., Lin, J.-J., Zhang,C.-h., Sredni, D., Evans, T., and Kung, H.-f.: "Differential regulation ofneurogenesis by the two Xenopus GATA-1 genes", Mol. Cell. Biol., 17,436-443 (1997).
Xu, R.-H., Kim, J., Taira, M., Sredni, D., and Kung, H.-f.: "Studies on the role of FGF signaling in neuroscience using conjugated/aged animal caps and dorsal ectoderm grafted embryos", J. Neurosci., 17, 6892-6898 (1997).
Taira, M., Saint-Jeannet, J.-P., and Dawid, I. B.: "Roleof the Xlim-1 and Xbra genes in anteroposterior patterning of neural tissueby the head and trunk organizer", Proc. Natl. Acad. Sci. USA, 94,895-900 (1997).
Sheng, H. Z., Bertuzzi, S., Taira, M., Dawid, I. B., and Westphal, H.: "The expression pattern of Lhx5 suggests a role inmouse forebrain specification", Dev. Dyn., 208, 266-277 (1997).
1996 †
Bertuzzi, S., Sheng, H. Z., Copeland, N. G., Gilbert, D. J., Jenkins, N.A., Taira, M., Dawid, I. D., and Westphal, H.: "Molecular cloning, structure and chromosomal localization of the mouse LIM/homeobox gene Lhx5", Genomics, 36, 234-239 (1996).
Karavanov, A. A., Saint-Jeannet, J.-P., Karavanova, I., Taira, M., and Dawid, I. B.: "The LIM homeodomain protein Lim-1 is widely expressed in neural, neural crest, and mesoderm derivatives in vertebrate development", Int. J. Dev. Biol., 40, 453-461 (1996).
Minucci, S., Saint-Jeannet, J.-P., Toyama, R., Scita, G., Taira, M., Levin, A. A., Ozato, K., and Dawid, I. B.: "Retinoid X receptor-selective ligands produce malformations in Xenopus embryos", Proc. Natl. Acad. Sci.USA, 93, 1803-1807 (1996).
Agulnick, A. D., Taira, M., Breen, J. J., Tanaka, T., Igor B. Dawid, I. B., and Westphal, H.: "Interactions of the novel LIM domain binding factor Ldb1 with LIM homeodomain proteins", Nature, 384, 270-272 (1996).
1995 †
Toyama, R., Curtiss, P. E., Otani, H., Kumura, M., Dawid, I. B., and Taira, M.: "The LIM class homeobox gene lim5: Implied role in CNS patterningin Xenopus and zebrafish", Dev. Biol. 170, 583-593 (1995).
Taira, M., Evrard, J.-L., Steinmetz, A., and Dawid, I. B.: "Classification of LIM proteins", Trends Genet. 11, 431-432 (1995).
Zhadanov, A., Bertuzzi, S., Taira, M., Dawid, I. B., and H., W.: "Expression pattern of the murine LIM class homeobox gene Lhx3 in subsets of neural and neuroendocrine tissues", Dev. Dyn., 202, 354-364 (1995).
Xu, R.-H., Kim, J., Taira, M., Sredni, D., and Kung, H.-f.: "A dominant negative bone morphogenetic protein 4 receptor causes neuralization in Xenopus ectoderm", Biochem. Biophys. Res. Comm. 212, 212-219 (1995).
1994 †
Taira, M., Otani, H., Jamrich, M., and Dawid, I. B.: "Expression of the LIM class homeobox gene Xlim-1 in pronephros and CNS cell lineages ofXenopus embryos is affected by retinoic acid and exogastrulation", Development 120, 1525-36 (1994).
Taira, M., Otani, H., Saint-Jeannet, J. P., and Dawid, I. B.: " Role of the LIM class homeodomain protein Xlim-1 in neural and muscle induction by the Spemann organizer in Xenopus", Nature 372, 677-9 (1994).
Fujii, T., Pichel, J. G., Taira, M., Toyama, R., Dawid, I. B., and Westphal, H.: "Expression patterns of the murine LIM class homeobox gene lim1 in the developing brain and excretory system", Dev. Dyn. 199, 73-83 (1994).
1993 †
Taira, M., Hockman, S. C., Calvo, J. C., Taira, M., Belfrage, P., and Manganiello,V. C.: "Molecular cloning of the rat adipocyte hormone-sensitive cyclic GMP-inhibitedcyclic nucleotide phosphodiesterase", J. Biol. Chem. 268, 18573-18579(1993).
Dawid, I. B., Otani, H., Curtiss, P., and Taira, M.: "Regulatory interactions during embryogenesis in Xenopus laevis", CR Acad. Sci. III 316, 945-958 (1993).
Tadano, T., Otani, H., Taira, M., and Dawid, I. B.: "Differential induction of regulatory genes during mesoderm formation in Xenopus laevis embryos", Dev. Genet. 14, 204-211 (1993).
Taira, M., Hayes, W. P., Otani, H., and Dawid, I. B.: "Expression of LIM class homeobox gene Xlim-3 in Xenopus development is limited to neural and neuroendocrine tissues", Dev. Biol. 159, 245-256 (1993).
1992 †
Taira, M., Jamrich, M., Good, P. J., and Dawid, I. B.: "The LIM domain-containing homeo box gene Xlim-1 is expressed specifically in the organizer region of Xenopus gastrula embryos", Genes Dev. 6, 356-366 (1992).
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