東京大学大学院理学系研究科 生物科学専攻

Department of Biological Sciences
Graduate School of Science
The University of Tokyo

研究室・教員一覧 フリス研究室

EN

生物情報科学科 フリス研究室 生物情報科学科

研究室サイト

研究課題

  1. 1. Genome evolution
  2. 2. Methods for comparing genetic sequences
  3. 3. Genetic palæontology

Finding interesting information in genetic sequences

We study genetic sequences using computers, mathematics, and algorithms. We like finding ancient and subtle relationships between sequences. For example, we are finding partial conservation of DNA that controls gene expression in diverse animals, such as humans, molluscs, arthropods, and even corals. These DNA sequences all control embryonic development, revealing “deep homology” across animals. We also hunt for fossils in genome sequences. Sometimes, DNA from a virus or other entity is inserted in a genome, and then decays by mutations. Finding such decayed “fossils” is the main way we can know about ancient viruses. To analyze sequences, we design probability calculations and efficient algorithms. The most important thing is critical thinking, rather than cargo culting popular and prestigious methods and jargon.